c. 2005
DS-DNA: second largest group
- one order
- three families
- several genera in each family
- it appears there is a single family in each order
- six or seven families
- it appears there is a single family in each order
- five families
- it appears there is a single family in each order
- seven families
- one order
- four families
- several genera in most families
- fourteen families, each one in one order
- one order with three families
- seven more families
- so: 24 families in all, it appears 18 orders
************************************************
Corona Virus
Positive Sense SS-RNA
the one order with multiple families:
Order nidovirales
- family: Coronaviridae
- genus: Coronavirus
- genus: Togovirus
- family: Arteriviridae
- genus: Arterivirus
- family: Roniviridae
- genus: Okavirus
Coronaviruses infect birds and many mammals, including humans. The respiratory tract, gastrointestinal tract and neurological tissues are the most frequent targets of coronaviruses but other organs including liver, kidney, heart, and eyes can also be affected.Epithelial cells are the main target of coronaviruses, plus, with some coronavirus species, widely distributed cells such as macrophages.
Coronaviruses have a wider host range in vivo than would be expected from in vitro studies.
The cause of severe acute respiratory syndrome (SARS) in man is a coronavirus that is believed to have jumped from another animal species.
.... specific binding is required for the virus to establish infection.
****************************************
The Families In The Positive Sense SS-RNA Viruses
Family Leviviridae
- Genus: Levivirus
- Genus: Allolevivirus
- Genus: Narnavirus
- Genus: Mitovirus
- Genus Enterovirus
- Genus Rhinovirus
- Genus Cardiovirus
- Genus Aphthovirus
- Genus Hepatovirus
- Genus Parechovirus
- Genus Erbovirus
- Genus Kobuvirus
- Genus Teschovirus
- Genus Iflavirus (unassigned?)
- Genus Cripavirus
- Genus Marnavirus
- Genus Sequiviridae
- Genus Sequivirus
- Genus Waikavirus
- Genus Sadwavirus (unassigned?)
- Genus Cheravirus (unassigned?)
- Genus Comovirus
- Genus Fabavirus
- Genus Nepovirus
- Genus Potyvirus
- Genus Ipomovirus
- Genus Macluravirus
- Genus Rymovirus
- Genus Tritimovirus
- Genus Bymovirus
- Genus Lagovirus
- Genus Norovirus
- Genus Sapovirus
- Genus Vesivirus
- Genus Hepevirus (unassigned?)
- Genus Avastrovirus
- Genus Mamastrovirus
- Genus Alphanodavirus
- Betanodavirus
- Genus Omegatetravirus (unassigned?)
- Genus Sobemovirus (unassigned?)
- Genus Luteovirus
- Genus Polerovirus
- Genus Enamovirus
- Genus Umbravirus (unassigned?)
- Genus Dianthovirus
- Genus Tombusvirus
- Genus Aureusvirus
- Genus Carmovirus
- Genus Necrovirus
- Genus Panicovirus
- Genus Machlomovirus
Order Nidovirales
- Family Coronaviridae
- Genus Coronavirus
- Genus Torovirus
- Family Arteriviridae
- Genus Arterivirus
- Family Roniviridae
- Genus Okavirus
Family Flaviviridae
- Genus Flavivirus
- Genus Pestivirus
- Genus Hepacivirus
- Genus Alphavirus
- Genus Rubivirus
- Genus Tobamovirus (unassigned?)
- Genus Tobravirus (unassigned?)
- Genus Hordeivirus (unassigned?)
- Genus Furovirus (unassigned?)
- Genus Pomovirus (unassigned?)
- Genus Pecluvirus (unassigned?)
- Genus Benyvirus (unassigned?)
- Genus Alfamovirus
- Genus Bromovirus
- Genus Cucumovirus
- Genus Harvirus
- Genus Oleavirus
- Genus Ilarvirus (unassigned?)
- Genus Ourmiavirus (unassigned?)
- Genus Idaeovirus (unassigned?)
- Genus Tymovirus
- Genus Marafivirus
- Genus Maculavirus
- Genus Closterovirus
- Genus Ampelovirus
- Genus Crinivirus
- Genus Potexvirus
- Genus Mandarivirus
- Genus Allexivirus
- Genus Carlavirus
- Genus Foveavirus
- Genus Capillovirus
- Genus Vitivirus
- Genus Trichovirus
- Genus Barnavirus
Then a long list of unassigned viruses.
Terminology
ORF (do not confuse with a disease by that name). New term for me:
In molecular genetics, an open reading frame (ORF) is the part of a reading frame that has the ability to be translated. ... In eukaryotic genes with multiple exons, introns are removed and exons are then joined together after transcription to yield the final mRNA for protein translation. See wiki.
No comments:
Post a Comment